The Model Organism Linked Database


About
MOLD is an effort to publish Model Organism Data as 5 ★ Open Linked Data. MOLD is drawn from the respective organisms' InterMine instance, and is also linked with other LOD datasets from Bio2RDF and reuses ontologies such as Gene Ontology (GO) and Sequence Ontology (SO).
SPARQL endpoint is available at http://vt.mo-ld.org/sparql and Linked Data Fragments is available at http://ldf.mo-ld.org.

Social activity
GitHub
https://github.com/mo-ld Code
Docker
https://hub.docker.com/u/mold/ Docker
Forum
https://groups.google.com/forum/#!forum/mo-ld Forum

MOLD Network
Model Organisms
Yeast
Saccharomyces cerevisiae is a species of yeast. It is perhaps the most useful yeast, having been instrumental to winemaking, baking, and brewing since ancient times. It is believed to have been originally isolated from the skin of grapes (one can see the yeast as a component of the thin white film on the skins of some dark-color fruits such as plums; it exists among the waxes of the cuticle). (source: dbpedia )
YeatMine: http://yeastmine.yeastgenome.org
Zebrafish
The zebrafish (Danio rerio) is a tropical freshwater fish belonging to the minnow family (Cyprinidae) of the order Cypriniformes. Native to the Himalayan region, it is a popular aquarium fish, frequently sold under the trade name zebra danio. The zebrafish is also an important and widely-used vertebrate model organism in scientific research, and was the first vertebrate to be cloned. (source: dbpedia )
ZebrafishMine: http://www.zebrafishmine.org/
Fly
Drosophila melanogaster is a species of fly (the taxonomic order Diptera) in the family Drosophilidae. The species is known generally as the common fruit fly or vinegar fly. Starting with Charles W. Woodworth's proposal of the use of this species as a model organism, D. melanogaster continues to be widely used for biological research in studies of genetics, physiology, microbial pathogenesis, and life history evolution. (source: dbpedia )
FlyMine: http://www.flymine.org/
Rat
The brown rat, also referred to as common rat, street rat, sewer rat, Hanover rat, Norway rat, brown Norway rat, Norwegian rat, or wharf rat (Rattus norvegicus) is one of the best known and most common rats. One of the largest muroids, it is a brown or grey rodent with a body up to 25 cm (10 in) long, and a similar tail length; the male weighs on average 350 g (12 oz) and the female 250 g (9 oz). (source: dbpedia )
RatMine: http://www.ratmine.org/
Mouse
The house mouse (Mus musculus) is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. It is one of the most numerous species of the genus Mus. Although a wild animal, the house mouse mainly lives in association with humans. The house mouse has been domesticated as the pet or fancy mouse, and as the laboratory mouse, which is one of the most important model organisms in biology and medicine. (source: dbpedia )
MouseMine: http://www.mousemine.org/mousemine/
Human
Homo sapiens (Latin: "wise man") is the binomial nomenclature (also known as the scientific name) for the human species. Homo is the human genus, which also includes Neanderthals and many other extinct species of hominid; H. sapiens is the only surviving species of the genus Homo. Modern humans are the subspecies Homo sapiens sapiens, which differentiates them from what has been argued to be their direct ancestor, Homo sapiens idaltu. (source: dbpedia )
HumanMine: http://www.humanmine.org/

Fragments-based access

Query the MOLD datasets in your browser through the light-weight Triple Pattern Fragments interface.

Alternatively, you can browse the MOLD fragments interface manually.

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